Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015925574.1_cds_XP_016473813.1_65902
CDS Infomation

[gene=LOC107795651] [db_xref=GeneID:107795651] [protein=E3 ubiquitin-protein ligase MBR2-like isoform X2] [protein_id=XP_016473813.1] [location=complement(join(42935..43066,43174..43317,43398..43496,43752..43802,44219..45799))] [gbkey=CDS]
Sequence

ATGGTATCTTCTAATGAGACCAATTTTCCATTTTTCGACCCTGTGAGCCAAGAGAGACAG
AACGTAACCGGGTGGAGTTTAGGAGAATCCAGCTCCTCAATTACACCGAATTGTGCAAGT
CAGAGTGAACAGAAAACAGATCATGGAAGGTCATCCACGATGACTACTTATCCTGGACCT
TCACATTTCTGTAACGAACAGCAATATGGGTCTTCTGACATTCTGTCATTGAGTAATACT
GAAGAAAATTTAAACAGCCATCGAATAGATAACATCACTTTATTTTCTCGAGGTTATAGT
TCTAGCACTATTCCTCATGATATCAGCAGAAATCCAGTATTTGAGGGGCACAGCGACGAT
AATGATGATGACGGTGACTCTCAAGTGATGGAGTGTACTCCATACAACTCTGATAGACCA
GGAAAAGAGCAAAAATCATCTGCTAGTACTTCTGGAACTAATGGATATTTGATGGATGAT
AGTGATGGCAGGCCAGACAGTACACTGGATGGTCGGCGCTTTTGTAAGAGAAAAGCATTT
GAAGGATATCTAGCGCAATCTTCAGGGAGTGGTAGTTCTAATTATATTCCTCTTGCTGAG
AATGACTTATGGGATTCTACACCTGCTCCTCCACATAGTATGAGTACAGGTGCAAATATC
TCTGCTCCAACAGAAAGTAACAGAAGCATCAATATGTCAGAGCAGGTGATCCCAAGACTT
GGGCTTACCATGGGAGGAGCTGTTACAGAAACTCCTCTTGATACACTGGCTTCAAGATCA
CAGAGAAATTTCAGGGTGAGGATTAATGGCTCACTTCAGCAAGATTATCTTCCTAGTAAT
CCCTTTCCTGCTGTGGATGATGTTGGAAATGTTAATCTGTCATCTGAACAGCAATTACCA
GAGCTCCTTCCTAATATCTCTTTGGATTTGAGGTCTATATCTGCTGCAGACAGTGGAAAT
ACTCAAAGGCAGCCTGTTGTAATGCATGTTCCTTCTCTGCATCGACGTGCACATACTAGG
TGGAATTCAGCATCAAGTTCAAGAACTGGCAGTTCATCAAGTTTTTCTGGTGAGAGAAAT
TCAGCAACATTTGAAGAGCCTAACTCAAGAAGTGTGTCAAGAAACATCTCACAACATCCT
ATGTTCATACCTTCAACTGATGGGAGAAACTGGAACCAAAATCTTGCCAACTGGAGTTTA
GCTGGAAGAAATATTTCTGTTGCTGGAAATGTCGCATCCACATCTCGCAACAGCTCCAGT
TCAGGGGTCCACACATCCCCTCCTACTAGGGTTCTCCACAGATCTCCTCAATATCATCGG
AGACTGCAAGAATTAGTCCGTAGATCTTTGTTGTCTTCAGATGGCGCTGAATCTGGAGGT
CATAGTGGTAATAATCGTCCACTACATTTGAGTTCTGCTGTCTCACAGGAGATGGCACTA
TCTGGAAACCATGAGCATCGTACATCGAGTTCAAGGTCAGCAATGATGTCGGAGCGGCAT
CTTGATGGTGCTACCGGAGTCCCCTATTCCTGGAGGAATTTGGCTGCTGCACGTGAACGA
AGAAGCAGGGTAGTCTTTGAGATTCGCAATGTGTTAGATCTTATGCGCAGGGGAGAGGGC
CTAAGATTTGAGGATGTTATGATGCTTGATCAGTCAATCTTCTTTGGGATTCCGGATATT
CATGATCGCCATAGGGATATGCGGCTTGATGTTGATAATATGACATATGAGGAATTACTG
GCACTTGGGGAGCGCATTGGGGATGTTTGCACTGGGCTAACCGAAGAAACTATTTTGAGT
CGTTTGAAGCAGCGAAATTATATTTGCATAAAAACAGAAGAACCTGAGGATGCAGAACCA
TGCTGCATATGTCGGGAAGAATATAACGATGGAGATGATCTTGGAACACTGAATTGCGGC
CACGACTTTCACGCTGGCTGCATTAAGCAATGGCTCATGCAGAAGAATATATGCCCGATT
TGCAAAACAACAGGGCTGACTACGTGA

Peptide Sequence

PEP ID

XP_016473813.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase MBR2-like isoform X2 [Nicotiana tabacum]
Sequence

MVSSNETNFPFFDPVSQERQNVTGWSLGESSSSITPNCASQSEQKTDHGRSSTMTTYPGP
SHFCNEQQYGSSDILSLSNTEENLNSHRIDNITLFSRGYSSSTIPHDISRNPVFEGHSDD
NDDDGDSQVMECTPYNSDRPGKEQKSSASTSGTNGYLMDDSDGRPDSTLDGRRFCKRKAF
EGYLAQSSGSGSSNYIPLAENDLWDSTPAPPHSMSTGANISAPTESNRSINMSEQVIPRL
GLTMGGAVTETPLDTLASRSQRNFRVRINGSLQQDYLPSNPFPAVDDVGNVNLSSEQQLP
ELLPNISLDLRSISAADSGNTQRQPVVMHVPSLHRRAHTRWNSASSSRTGSSSSFSGERN
SATFEEPNSRSVSRNISQHPMFIPSTDGRNWNQNLANWSLAGRNISVAGNVASTSRNSSS
SGVHTSPPTRVLHRSPQYHRRLQELVRRSLLSSDGAESGGHSGNNRPLHLSSAVSQEMAL
SGNHEHRTSSSRSAMMSERHLDGATGVPYSWRNLAAARERRSRVVFEIRNVLDLMRRGEG
LRFEDVMMLDQSIFFGIPDIHDRHRDMRLDVDNMTYEELLALGERIGDVCTGLTEETILS
RLKQRNYICIKTEEPEDAEPCCICREEYNDGDDLGTLNCGHDFHAGCIKQWLMQKNICPI
CKTTGLTT

Transcript Sequence

Gene sequence data has not been registered.